Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLAAFEAFVKVMETGSISVAADQLFITQPAVTKRIHSLEEYFGVKLFESAGRGVQATHAAHSLLPKVKSWLNELRDIHHTLSHEQTQIQGRLKIGTSHHIGLHHLPAPLKHFVQQFPQVTLDVHFVDSEQAHEQVLAGDLELAFLTLPPSGDERLNYITIWNDPLVFVAAPFHPLAQKKNLILQDLIEYPSLLPAAQT--YTAQITLAEFEKQCLKPKITMSNNPLESIRMLVSIGLGWSVLPKTLLN---QDMQQLDLN-VEMNRQLGMVWHPARTQSRAMQELIKMMQE
1IZ1 Chain:B ((1-289))MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFF-PRHPGIEIVNIAQEDLYLAVHRSQSGKFGKTCKLADLRAVELTLFPRGGRPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAAIRWPDIAFARIVGTRVKVPISCIFRKEK-QPPILARFVEHVR-


General information:
TITO was launched using:
RESULT:

Template: 1IZ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1297 -96155 -74.14 -339.77
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : -74.14
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.510

(partial model without unconserved sides chains):
PDB file : Tito_1IZ1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1IZ1-query.scw
PDB file : Tito_Scwrl_1IZ1.pdb: