Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKGPDMQAIILDTETHTLNG--L-PIEIAYAPIEINAGKLTL-----------DKSKLFDQLYQVGTPISYAAMAVHHILESDLENQP---HYKTF----KLPDT----TTYIIGHNI-DYDIAAIARC----GVDVS-HIKPICTLALTRKTW---PDAEAHNISALIY-MISQGSSKARELLKGAHRADADIILTANILMHIVYHLNIHDIEELYRVSEEARIPTTINFGKHKGTAIAELPKDYIQWLLRQDELDVYLRKALESAF
1Y97 Chain:A ((5-208))---PRAETFVFLDLEATGLPSVEPEIAELSLFAVHRS----SLENPEHGALVLPRVLDKLTLCMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNGFDYDFPLLCAELRRLGARLPRDTVCLDTLPALRGLDRAH----GYSLGSLFHRYFRAE-------PS---SAEGDVHTLLLIFLHRAAEL------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1Y97.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 630 -29809 -47.32 -194.83
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -47.32
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.275

(partial model without unconserved sides chains):
PDB file : Tito_1Y97.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y97-query.scw
PDB file : Tito_Scwrl_1Y97.pdb: