Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNISYELEK--------KIVNLNALYNEEE--AELSLRLSQNIRKNQQDGYVYSLISRGFEIKGLKLWLVDKNIDQLKQWFYVSSVLRAESCKYSSGYTLSTPDEFIFPLLSDNTEIINKFAYLDTVNLLWGEFEPSYQEAKFKPSKDDPRFRTHALQAVLRNDWEDYKKIKEVANQKINKLREVVQFEFGIYDAIYEKDKDKIIEIVQTLLNPRVHKTYNKDFGEEFNGEIWSHHPVMFTKLA----WMNGLEIEIDNPLVPMELMPIKPLEHYDYHYDFLDPNWKPKSLFEKLFGKKRNK
3BF8 Chain:A ((1-255))MKLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHN-------IIQVDVRNHGLSP-----REPVMNYPAMAQDLVDTLDAQQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDY--------------HVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDH--------------PALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAGHW-VHAE------KPDAVLRAIRRYLNDH


General information:
TITO was launched using:
RESULT:

Template: 3BF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1325 52456 39.59 217.66
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 39.59
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.294

(partial model without unconserved sides chains):
PDB file : Tito_3BF8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BF8-query.scw
PDB file : Tito_Scwrl_3BF8.pdb: