Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHIYILGSAAGGGCPQWNCNCPNCHGVRTGTINAKVRTQSSIAISENGVDWILLNASPDIRQQLFDFKAAQPARKLRDTGITNVILMDSQLDHTTGLLTLRE-----------GCPMNVWCTEMVYQDLTTGFPVFNMLKHWNGGLQYHQVDPKQAFIIDGFENLEFLPLIIQSAAPPYSPHRHDPHEGDNIALIIKDHKTQKQLFYAPGLGKIDDQIMQIMQDSDCVMIDGTLWTDDEMQQTGVGKKTGREMGHLYISGEGGSLSYLNQLSTPKKVLIHINNTNPILNEDSAQFAELKANGVEVAFDGMQIEL
1ZKP Chain:D ((25-267))MKMTVVGFWGGF--PE------------------AGEATSGYLFEHDG-FRLLVDCGSGVLAQLQKY--I------TPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPELPIYGHTFDENGFHSLTHE--------PHTKGIPYNPEETLQ---IGPFSISFLKTVHPV-------------TCFAMRITAG--NDIVVYSADSSYIPE-FIPFTKDADLFICECNMYAHQE----------AAKAGHMNST---EVASIAKDANVKELLLTHLPHTGNPA-DLVTEAKQIFSGHITLAHSGYVWN-


General information:
TITO was launched using:
RESULT:

Template: 1ZKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1393 -58702 -42.14 -253.02
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain D : 0.69

3D Compatibility (PKB) : -42.14
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.385

(partial model without unconserved sides chains):
PDB file : Tito_1ZKP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ZKP-query.scw
PDB file : Tito_Scwrl_1ZKP.pdb: