Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHSQPLLDCWNLDQILDDLNAHGFAIVNQAYSAEYHTQVAKECSHHFD--EFREAGIQNG---VVSTIRSDHILWINESL---PVAEQHVETLTSFCQHLNQAFFL-GIK-EVEAHFACYNP-GEFYALHRDNPQQKNDRIMSTVYYLHPQWQDD-WGGQLRLQDKNDI-WHIITPEPNRLVIFQSN--LLHEVLVSKQQRLSITAWLRSGNSIWV
4BQY Chain:A ((17-225))-------LKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPN-GDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDAD----


General information:
TITO was launched using:
RESULT:

Template: 4BQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 828 -9655 -11.66 -51.08
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -11.66
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_4BQY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BQY-query.scw
PDB file : Tito_Scwrl_4BQY.pdb: