Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSLLRLDRLHYCILMSMGCISSPLVWAEDLNSDVAKLPTLHVEAT-------------RTDTGYLQTPASVFRIEAPQVDSSSQVNLTEVVKGIPSLQIRNREN-YAQDLQLSMRGFGARSTFGVRGIRLYVDGIPATMPDGQGQTSNIDLSSLDHVEVLTGPFSSLYG-NSSGGTILTSTKEGQGKDSIELSYSGGSHDKSRAGLVLQGGAKGANEPSYIISSSYFDT--DGYREHSGAEKVLNNAKLSWNLDDGSKINWVTNYVKINADDPGGLTRADWQ-----NNPKQVV-QNVL--DYNARKEIEQTQTGLTWSKPINDQHELYAMTYMGQRQVTQYQSIPDTV-QKNPN-TPYQAGGVIDFKRNYYGADFRWTGKEL-LPN-TTLSIGVALDAMKEDRQGYQNFN--DTG--------------DK----GVKG--A------LRRDEDNTLWNIDPYVQASWQFLPTWRLDTGVRYSNVHYKSKDYYIVGLNGDNSGKTSYEEVLPSVALSWQITPEVLAYASYAKGFETPTFTEMAYPAQG--GASTLDLKPSTSDTYETGLKSQ-N-QLGDFTLAVFQTKTKNDIVSAESFGGRSTFRNADKTLREGVEFAWNKKLWRDLIAIASYTYLDATFDSTVPAAG----KISEIPEGNAIPGIAKNQAYVSLAWQPSHGLYGGVDVQYMDKVYVNDTNSDAAPSYSVTSANVGYAWVMGDWKVNSFARVDNLFDRNYAGSVIVNDSTQPVGRYFEPADGRNWSAGLRVIKQF 5FP1 Chain:A ((18-718)) --------------------------------------------TQEESLKVDQSANSKFVAPLLDTPKSVSVISKQLIEDTKVTTLADALRTVPGITLGAGEGGNPNGDRPFIRGYSS-------ESSMYIDGIRNSTS------QNREMFAVEQVEVTKGSASAMGGAGSVGGSINMISKVAKKGDFLEGSVAAGTDNYQRITLDGNKDF--GNGIAARVAVLGHQNEKAGQSNGAEYKRVGIAPSITFGLDTPTRATLSYYYLQTDDKPDSGIPYWDSSLGKAQGKPAEVKQGTYYGWKDRDFQKQENHIGTIKLEHDLTDNITITNTAMYAKSKNDYVWTNPDDSKGNVGKGLVWHRLNSAITDSETFTDQLALTGKFDTGFLKHRFNVGAEYSKQKTDKGGYNIIDAKGNVSSTGFYSDCSDLSTNWCTSLNGPTQKPFVDRLQARPDFDATVESTSVYLLDNIEITPKWLLDLGLRWDKFEAEQNFLATSS-AAAYTAKNNSDFVTYQAGITFKPTENGSIYTSYATSASPVGLNAGWGDNSETINANNQMIDPEEAQTFEIGTKWDFLDNHLNLTAAIFRTEKQNTRVQID----PTTYANVGESKVDGFELGLNGEITDKWNISAGYTYLDSELTKNGKSCRSGKCTDQSIYNGNQMPNVPKQAATLWTTYKVLPQLTVGAGAVYSDKVYGDVANTKWVPSYVRYDAMARYNVN---KNVDLQLNINNLSDKRYFTKAYA-------SHYATEAEGRSAVLAVNFKY--

General information: TITO was launched using: RESULT: Template: 5FP1.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 4065 229017 56.34 360.09 target 2D structure prediction score : 0.42 Monomeric hydrophicity matching model chain A : 0.68 3D Compatibility (PKB) : 56.34 2D Compatibility (Sec. Struct. Predict.) : 0.42 1D Compatibility (Hydrophobicity) : 0.68 QMean score : ?

(partial model without unconserved sides chains): PDB file : Tito_5FP1.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5FP1-query.scw PDB file : Tito_Scwrl_5FP1.pdb: