Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLLIASLIAISSSSIFAADTTASAAKNDVFKQAEQLYAAKNYPAAFQEVQRLAQTGNAQAIYNLGYMTQMGQGTAKDNAKALKYYEDASNKGYAQASYTLAQIYETGELGVAKDSNKFSQYIQKAAAQGSDDATVKIATILFAQK-KPQSHQIALQKLAPLIRKGN--YPA--I-QVKALYDISQGVENKNPLMKRQGIEALQTIAQKG-YAPASMALATMMANGN--IIPQNLPQAKQIFTELAKQNVPNARESLASVEKIIAEKNKQAAAAPTQPAPKK
3RJV Chain:A ((4-208))---------------------------------------------EPGSQYQQQAEAGDRRAQYYLADTWVS----SGDYQKAEYWAQKAAAQGDGDALALLAQLKIRN--PQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHG----PEDDVKASEYFKGSSSLSRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFDTGCEEFDR-----------------------


General information:
TITO was launched using:
RESULT:

Template: 3RJV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1033 -2394 -2.32 -12.21
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -2.32
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.560

(partial model without unconserved sides chains):
PDB file : Tito_3RJV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RJV-query.scw
PDB file : Tito_Scwrl_3RJV.pdb: