Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMDLFLNRKSFVVKSLAITVTALMMSGANAATSDKEEIRKLRQEVEALKALVQEQRQVQQQQQQVQQQQQVQLAEVKAQPQPAAAPASPLASLKSKTGADVNLYGFVRGDANYIIEGADNDFADVSKSNGKTQDKLRATAKTTRLGLDFTAPVSGAKVGGKIELDFASSDNDKSENVRIRHAYLTYN-----NWLFGQTTSNFLS-SH-APEMIDFS-TNI-------GGGTTRIPQVRYNYKLAPATQLFVSAEEGNSSATGDSVKYRLPVLTAKVTQGYAD---GNGNASARAFVENYKS-----------------------------------------GAGDDKTGWGIAAGTDFKVSDPLKLFADASYVVGNSNYLYGSNSAYTLVNDNIEQNEFVAVQVGGTYKIL-----------------P------NLRSTLAYGAQFADDGTDYAKN--NVTANEKVQQAWINFIYTPVKPIDLGVEYVNGKRDTFEG--KSYKDNRVGLMAKYSF
4RJW Chain:A ((34-429))------------------------------------------------------------------------------------------EVATTDKEFSFKLGGRLQADYSRFDGFYTK----------NGNTADAAYFRRAFIELGGTA---YKDWKYQINFDLSHNTG-SSDNGYFDEASVTYTGFNPVNLKFGRFDPDFGLEKATSSKWVTAPERNAAYELADWINTHQDGMGAQVNSTLADMAYLSAGVSAKDADD---SDGDSVKQFNFRGVFAPMHEAGNVLHVGVNYAYRDLDDTAFDSRIRPRLGMRGIATSGGNDAGDNGNRATFGGVSNSPAGSYKDDSVWGLEGAW--AMG-PFSAQAEYLARKLKADDN------------AYKDIKAKGYYAQLAYTLTGESRQYKLEGAKFDSVKPENKEIGAWEVFYRYDNIKVEDDNVVADTATREVGDTKAKAHNLGVNWYVNDAVKISAAYVKAKTDKITNNNGDDDGDGFVTRLQYVF


General information:
TITO was launched using:
RESULT:

Template: 4RJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1745 96789 55.47 312.22
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 55.47
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.033

(partial model without unconserved sides chains):
PDB file : Tito_4RJW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RJW-query.scw
PDB file : Tito_Scwrl_4RJW.pdb: