Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSANTFPAQIEPFKWAEQGFTWSGQLPLSRFARIAREAVGSIDNQLINID------CKLSMDAYHRIVWLDGHMETKVPMECQRCLEPVEMPIVSDFHIALVDDESLIERLDEDADFIVLGESESSTKGDFDTPASINLLALLEDELLLLMPLSPKHDACEHKHQPTIQNVVEEKRDNPFDVLAGLKGKLNS
4B4P Chain:A ((6-147))------SAQVTG-TLLGTGKTNTTQMPA----------LYTWQHQIYNVNFIPSSSGTLTCQAGTILVWKNG-RETQYALECRVSIHH--------------SSGSINESQWGQQSQVGFGTACGNKKCR-----------FTGFEISLRIP----PNAQTYPLSGDLKGSFSLT-NKEVNWSASIYVP---


General information:
TITO was launched using:
RESULT:

Template: 4B4P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 680 25957 38.17 192.27
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 38.17
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.049

(partial model without unconserved sides chains):
PDB file : Tito_4B4P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4B4P-query.scw
PDB file : Tito_Scwrl_4B4P.pdb: