Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNQIPLKPQNERFTDDQWQAIFDQGDNLLVSASAGSGKTTVLVRRVIEKLKM-GFDIDELLIVTFTEAAAREMKERIQEALQEAVNSESDPVRRQHFTKQLVLLPTANISTLHAFCLTVIRRYYYLIDIDPVFRMLTDETETILMKEDVWDELREALYAENDERFFQLTMNFSNDRSDDGLTNLVFSLYEFARANPDPKKWLEQLSDNYRLPEGLAKSRLYQEQIRPLVLADIYQCVQLYEQMTQLAQGEGLEKMHEQVAGEQQQIKNIYEAFSQDRLEEAYAGLEQLTFSTFKSSRKAELKEISNEVKGMRDKAKKLIQQISKSYFPVSPSQMEELTDKALPLVEEMTKVTQSFMDGFSMRKREKGVLDFNDLEHLALQILTEKTKDAWLPSEASKHYRKKFKEVMVDEYQDVNQLQEAILYWLREPDDTKGNMFMVGDVKQSIYSFRLADPSLFIGKYENFSKKEGGRRIVLAENFRSRKEVLSFTNLIFEQLMDPAVGQINYDEAAKLIQGFSDFPENEQFEPEIMIYEKEQEESEIEIPTDDILEDKTEGELFMTGLKIRQLIDSSFMIYDKKSKKSRPIEYKDIVLLTPTKKNNLTILEIFKTLDIPLEMKDAQNYFQATEIRTMISLLQLIDNPYQDIPLAAVLRSPIVGLIEPELASIRLADRAH--TYYDAVLAYQAS-NEDELAAKLEHFGKQLEHWRELARRSSITDLLWDIYYETGYLEYVVGL-PAGAQRQANLYALVDRAKAYEQS---SFRGLYQFVRFIEKMQEKDK---DLAEPVISIEDNAVRVMTIHASKGLEFPVVFLLDMTKEFNLQDLRNRYAFEEKLGAGIRYMDPETRVLYDTLPFQAIKLVKQNKLLSEEMRKLYVGLTRAEQKLFIVGSYKNKEQMIQTWSEAADHEELVFDPALRLKGRSSLMNWIGYGLIRHPEMQKYLEEEISTSLLQHSNAQFSISWMNQQSIIEQRQLLAEKELVNLDQQMKEDETLLADSLQKRLAYEYPYQASSQTTSYQSVSEIKRLFEDPDDTQESRLTLESSQNKAASRQFRYTQEQLAEPKFLQKDRQVSAAAVGTATHALLQLLPLEMPTTESIHQKLQELVRKRLVDEKVAKKVDVSSIIWFFQTELGQQLIANKENVKREQPFSMLLPADEVFQDYPNQEDELLIHGIVDGYLEEKDHLNIYDFKTDFILHPDDPAEIDAIVQKYQGQLRLYQQAMSEALNKPVENVFLILLRVKQIININK
4C2U Chain:A ((6-632))-----GPDLLQALNPTQAQAADHFTGPALVIAGAGSGKTRTLIYRIAHLIGHYGVHPGEILAVTFTNKAAAEMRERAGHLVPG--------------------AGDLWMSTFHSAGVRILRTYGEHIGLRRGFVIY-DDDDQLDIIKEVMGSIPG-----------------------ETQPRVIR--------------------------------------------GIIDRA-------KSNLW--T-----------------------PDDLDRS-------------------------------------REP---------------------FISGLPRDAAAEAYRRYEVRKKGQNAIDFGDLITETVRLFKEVP-------GVLDKVQNKAKFIHVDEYQDTNRAQYELTRLLASR---DRNLLVVGDPDQSIYKFRGADIQNILDFQKDY---PDAKVYMLEHNYRSSARVLEAANKLIENNTERLDKT--------LKPVK-----EAGQPVTFHRA------------------TDHRAEGDYVADWLTRLHGE-------------GRAWSEMAILYRTNAQSRVIEESLRRVQIPARIVGGVGFYDRREIRDILAYARLALNPADDVALRRIIGRPRRGIGDTALQKLMEWARTHHTSVLTACANAAEQNILDRGAHKATEFAGLMEAMSEAADNYEPAAFLRFVMETSGYLDLLRQEGQEGQVRLENLEELVSAAEEWSQDEANVGGSIADFLDDAALLSSVDDMRTKAEN--KGAPEDAVTLMTLHNAKGLEFPVVFIVGVEQGLLPSKGA---I-A-----------------------------EGPSGIEEERRLFYVGITRAMERLLMTAAQNRMQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4C2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3255 57254 17.59 93.40
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 17.59
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.378

(partial model without unconserved sides chains):
PDB file : Tito_4C2U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4C2U-query.scw
PDB file : Tito_Scwrl_4C2U.pdb: