Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLPSMSLHWSEGDNGGGSLGGSRRSFSKGSIYRHHFLSLDHSSARDVAVGLSRDVTNDRRATGTSAGFEWLQPWRTPQDCREGGVALLYSMQEVLENVRRARKTSLSELYAARGAGSPAASTTSLCHPQHLCPPRAATSGSSDDAEGRCGSVGEKSSCSAAGSRTSSVDRRRQRDRGERNVSVGKGVRSASDDSVQGIELATEVGRVAFSPPLQTATAAAASVPPIVPVIPRFSEVKTEQELIHQRQQQQPQPHPRSEAAKRRRCALANSGDDDDDAARSPHHPDASCPSGGCDQTARPGDSRHRPGMSVEWSGSDSNGDEPEALAQRRHASGVSADDDDVDTSNVHHGKDEERDEEEDRLSETDFGEGGHLACVPGDTLH-QRYTLLKALGVGRSSRVWLAVDLEQCSLARCQLIRELGEREVRRLFRTLERPMFVAIKVFRCDPAYADCATYELKLSALIHENVMRRRQQQQQQQQRWPPARASHSASLPSSPIAVPAACDDPGGDLQESSDGGENSTSRPCDEAAVRTRADPTSSTPRSGRISNSGSVSAEVASPASTSATAFSGRLTTVRDAFAVEGAFGTHQCLVMDVLGAGVDRAINEAHLNGFPSAVARSIMQSSLQGLVLLAAC-HLVHTDIKPENLFFTDLEDDVAEEMLTFQSAQLHASQRQTLCSSFAHRSTAASVMMEREEVAAHEQQQQQHHGDGGTAEHTGVGQRSPFSDPSLPDYTHVDEAAADLHTVHAANAADAGASGDRVASSVTTLSAVAGGHDTLHSSQDSIAQVSRRPNFARTPTRRRSAYDVRLSGLGLSLVVPPCLRLGVRVLANYAADGGGMTADELVRQDPLEQLHWLCAQQQARLLRLPGDDDDDGLGSVAEPWREERWRLAGACAPAESPPPPTLDIGMSEDFIDEAELRALGLQELPKSDADGGRCAAGMAPDEYEEADVTDFVGVPAVDKPAAHHRTTVTTADVGVVGGTLPPATWRTASAATRAGGGRRTPLAAAKRRLFAQCFHEGLATPRDPATVLTRCEGVAAASPTDSSSNSSSGAAPPAGAAAAAAAAATVLRRLECEIVRHQNYRRGAVLQSREYRAPEVLLGDFVLPACDIWSMGCIAYELVSGRFLIDCIVDRERFATALSWQQQQRHGRKGCRAPDDDGGGAHDAKDHSRDDDEDTQQRLNKWDGRPVYLEDTEQDLDVFHLKAIMRLLGPPPVSFLRQQPIGLFIDDFFDEHGNFRFWERGEAQEAGMRLADPYRQLELTHWAAASRVSGASVAVGSGADRQQSPPLPESVSGVAASLDTDPPGAPSAASVGQHVASAQARRDPQDTMNYPIRTPAWQDVQAILREKLGSAEEAADFEVFLRRCLQWDPARRATAAELLADKWLVKYSGVVADASESDVVAEKEGGGDSDGEERRL
1Q8Y Chain:B ((9-168))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAFKGEPYKDARYILVRKLG---FSTVWLAKDMVNN--------------------------THVAMKIVRGDKVYTEAAEDEIKLLQRVNDADN--------------------------------------------------------------------------------------------TKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1Q8Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 593 -35820 -60.40 -231.09
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain B : 0.59

3D Compatibility (PKB) : -60.40
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.467

(partial model without unconserved sides chains):
PDB file : Tito_1Q8Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Q8Y-query.scw
PDB file : Tito_Scwrl_1Q8Y.pdb: