Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence ---LCTTIQKGQIFRNILTCMSEFY-IKEEFSYTVCNGK-NYASPNRTI----LCIWEGHIIHVRLDERCNWTRLEGDQTEELESQNVEFKVLQKCVASKYKLDPPHAWDAGHGVKLG 2YUB Chain:A ((1-118)) GSSGSSGVQDQLPYSVTLISMPATTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTLQLLIEHDPVPQRLDQSGPSSG

General information: TITO was launched using: RESULT: Template: 2YUB.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 421 13416 31.87 123.08 target 2D structure prediction score : 0.53 Monomeric hydrophicity matching model chain A : 0.66 3D Compatibility (PKB) : 31.87 2D Compatibility (Sec. Struct. Predict.) : 0.53 1D Compatibility (Hydrophobicity) : 0.66 QMean score : 0.118

(partial model without unconserved sides chains): PDB file : Tito_2YUB.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2YUB-query.scw PDB file : Tito_Scwrl_2YUB.pdb: