Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSWKNWLIKINYCVYKKKRKGRMRKFLIILLLPSFLTISKVVSTEKEVVYTSKEIYYLSQSDFGIYFREKLSSPMVYGEVPVYANEDLVVESGKLTPKTSFQITEWRLNKQGIPVFKLSNHQFIAADKRFLYDQSEVTPTIKKVWLESDFKLYNSPYDLKEVKSSLSAYSQVSIDKTMFVEGREFLHIDQAGWVAKESTSEEDNRMSKVQEMLSEKYQKDSFSIYVKQLTTGKEAGINQDEKMYAASVLKLSYLYYTQEKINEGLYQLDTTVKYVSAVNDFPGSYKPEGSGSLPKKEDNKEYSLKDLITKVSKESDNVAHNLLGYYIS-NQSDATFKSKMSAIMGDDW------------DPKEKLISSKMAGKFMEAIYNQN-------GFVLESLTKTDFDSQRIAKGVS--VKVAHKIGDAD--EFKHDTGVVYAD--SPFILSIFTKNSDY------DTISKIAKDVYEVLK
5EEC Chain:B ((4-264))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVAEPFAKLEQDF--GGSIGVYAMDTGSGATVSYRAEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIRYGKN-------ALVPWSPIS-EKYLTTGMTVAELSAAAVQYSDNAAANLLLKELGGPAGLTAFMRSIG-DTTFRLDRWELELNSAIPGDARDTSSPRAVTESLQKLTLGSALAAPQRQQFVDWLKGNTTGNHRIRAAVPADWAVGDKTGTCGVYGTANDYAVVWPTGRAPIVLAVYTRAPNKDDKHSEAVIAAAARLALEGL-


General information:
TITO was launched using:
RESULT:

Template: 5EEC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1187 -16054 -13.52 -70.10
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.60

3D Compatibility (PKB) : -13.52
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.383

(partial model without unconserved sides chains):
PDB file : Tito_5EEC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EEC-query.scw
PDB file : Tito_Scwrl_5EEC.pdb: