Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIKKWLGLAALATVAGLALAACGNSEKKADNATTIKIATVNRSGSEEKRWDKIQELVKKDGITLEFTEFTDYSQPNKATADGEVDLNAFQHYNFLNNWNKENGKDLVAIGDTYISPIRLYSGLNGSANKYTKVEDIPA-NGEIAVPNDATNESRALYLLQSAGLIKLDVSGTALATVANIKENPKNLKITELDASQTARSL--SSVDAAVVNNTFVTEAKLDYKKALFKEQADENSKQWYNIIVAKKDWETSPKADAIKKVIAAYHTDDVKKVIEESSDGLDQPVW
4NTL Chain:A ((6-247))--------------------------------DKEITVAVQL--ESSKDILEIAKKEAEKKGYKINIMEVSDNVAYNDAVQHDEADANFAQHQPFMEMFNKEKKADLVAVQPIYYFAGGFYSK------EYQDAKDL-PENAKVGIPSDPTNEGRALAILNANGVIKLKEGVGFNGTVADVVENPKNITFESIDLLNLAKAYDEKDIAMVFCYPAYLEPAGLTTKDAILLEDKE-ASKHYALQVVTRKGE-KDS--EKIKVLKEAMTTKEVAEYIKKNSKGANIPAF


General information:
TITO was launched using:
RESULT:

Template: 4NTL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1243 16331 13.14 68.33
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 13.14
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.543

(partial model without unconserved sides chains):
PDB file : Tito_4NTL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NTL-query.scw
PDB file : Tito_Scwrl_4NTL.pdb: