Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MTKKVGVGQAHSKIILIGEHAVVYGYPAISLPLLEVEVTCKVVPAESPWRLYEEDTL----SM----------AV----Y---AS----LEYLNI-TEACIRCEIDSAIPEKRGMGSSAAISIAAIRAVFDYYQADLPHDVLEILVNRAEMIAHMNPSGLDAKTCLSDQPIRFIKN--VGF--TELEMDLSAYLVIADTGV-YGHTREAIQVVQNKGKDALPFLHALGELTQQAEIAISQKDAEGLGQILSQAHLHLKEIGVSSLEADSLVETALSHGALGAKMSGGGLGGCIIALVTNLTHAQELAERLEEKGAVQTWIESL 1KKH Chain:A ((3-313)) --GSHMIIETPSKVILFGEHAVVYGYRAISMAIDLTS-TIEIKETQEDEIILNLNDLNKSLGLNLNEIKNINPNNFGDFKYCLCAIKNTLDYLNIEPKTGFKINISSKIPISCGLGSSASITIGTIKAVSGFYNKELKDDEIAKLGYMVEKEIQGKASITDTSTITYKGILEIKNNKFRKIKGEFEEFLKNCKFLIVYAEKRKKKTAELVNEVAKIENK-DEIFKE---IDKVIDEALKIKNKEDFGKLMTKNHELLKKLNISTPKLDRIVDIGNRFG-FGAKLTGAGGGGCVIILVNEEKE-KELLKELNKEDVR-IFNC--

General information: TITO was launched using: RESULT: Template: 1KKH.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1488 13052 8.77 46.61 target 2D structure prediction score : 0.61 Monomeric hydrophicity matching model chain A : 0.71 3D Compatibility (PKB) : 8.77 2D Compatibility (Sec. Struct. Predict.) : 0.61 1D Compatibility (Hydrophobicity) : 0.71 QMean score : 0.437

(partial model without unconserved sides chains): PDB file : Tito_1KKH.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1KKH-query.scw PDB file : Tito_Scwrl_1KKH.pdb: