Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRLLVIGCGGVAQVAISKICQDSETFTEIMIASRTKSKCDDLKAKLEGKTSTKIETAALDADKVEEVIALIGSYKPEAVLNVALPYQDLTIMDACLATGVHYIDTANYEAEDTEDPEWRAIYEKRCKELGFTAYFDYSWQWAYQEKFKEAGLTALLGSGFDPGVTSVFSAYALKHYFDEIHYIDILDCNGGDHGYPFATNFNPEINLREVSAPGSYWEDGKWVEVEAMSIKREYDFPQVGQKDMYLLHHEEIESLAKNIPGVKRIRFFMTFGQSYLTHMKCLENVGLLRTDTINFNGQEIVPIQFLKALLPDPASLGPRTVGKTNIGCIFTGVKDGVEKTIYIYNVCDHQECYAEVGSQAISYTTGVPAMIGTKLVMNGTWKQAGVYNLEELDPDPFMEALNEYGLPWVVVENPQMVD
4INA Chain:B ((2-398))-AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVPYLDTANYEH------------------------FEYKEQWAFHDRYKEKGVMALLGSGFDPGVTNVFCAYAQKHYFDEIHEIDILDCNAGDHGYPFATNFNPEINLREVSSKGRYWENGEWIETEPMEIMQVWDYPEVGPKDSYLLYHEELESLVRNIKGLKRIRFFMTFGQSYLTHMRCLENVGMLRIDEIEVNGCKVVPIQVLKALLPDPASLASRTKGKTNIGCYIKGIKEGKARTIYIYNVCDHESCYREVNAQAISYTTGVPAMIGAKLMLEGKWSGKGVFNMEELDPDPFMDELNKQGLPWEVKEMEAL--


General information:
TITO was launched using:
RESULT:

Template: 4INA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 4 -1173 -293.25 -2.99
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.88

3D Compatibility (PKB) : -293.25
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.144

(partial model without unconserved sides chains):
PDB file : Tito_4INA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4INA-query.scw
PDB file : Tito_Scwrl_4INA.pdb: