Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence ---------------MALLAEFYSKEG------------------NMNTNLASFIVGL-IIDENDRFYFVQKDGQTY------------------------ALAKEEGQHTVGDTVKGFAYTDMKQKLRLTTLEVTATQ--DQFGWGRVTEVRKD----LGVFVDTGLPDKEIVVSLDILPELKELWPKKGDQLYIRLEVDKKDRIWGLLAYQEDFQRLARPAYNNMQNQNWPAIVYRLKLSGTFVYL----PENNMLGFIHPSERYAEPRL--GQVLDARVIGFREVDRTLNLSLKPRSFEMLENDAQMILTYLESNGGFMTLNDKSSPDDIKATFGISKGQFKKALGGLMKAGKIKQDQFGTELI----------------------------------------------------------------------------- 5DBJ Chain:D ((5-441)) SDHDYDVVIIGGGPAGSTMASYLAKAGVKCAVFEKELFEREHVGESLVPATTPVLLEIGVMEKIEKANFPKKFGAAWTSADSGPEDKMGFQGLDHDFRSAEILFNERKQEGVD---RDFTFHVDRGKFDRILLEHAGSLGAKVFQGVEIADVEFLSPGNVIVNAKLGKRSVEIKAKMVVDASGRNV------LLGRRLGLREKDPVFNQFAIHSWFDNFDRKSATQSPDKVDYIFIHFLPMTNTWVWQIPITETITSVGVVTQKQNYTNSDLTYEEFFWEAVKTRENLHDALKASEQVRPFKKEADYSYGMKEVCGDS--FVLIGDAARFVDPIFSSGVSVALNSARIASGDIIEAVKNNDFSKSSFTHYEGMIRNGIKNWYEFITLYYRLNILFTAFVQDPRYRLDILQLLQGDVYLEVLDKMREIIAAVESDPEHLWHKYLG

General information: TITO was launched using: RESULT: Template: 5DBJ.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1397 47986 34.35 167.78 target 2D structure prediction score : 0.53 Monomeric hydrophicity matching model chain D : 0.63 3D Compatibility (PKB) : 34.35 2D Compatibility (Sec. Struct. Predict.) : 0.53 1D Compatibility (Hydrophobicity) : 0.63 QMean score : 0.190

(partial model without unconserved sides chains): PDB file : Tito_5DBJ.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5DBJ-query.scw PDB file : Tito_Scwrl_5DBJ.pdb: