Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKDKQFAIPKATAKRLSLYYRIFKRFHAEKIERANSKQIAEAIGIDSATVRRDFSYFGELGRRGFGYDVKKLMTFFADLLNDNSITNVMLVGIGNMGHALLHYR-FHERNKMKIIMAFDLDDHPEVGTQTPDGIPIYGISQIKDKIKDTDVKTAILTVPSVKSQEVANLLVDAGVKGILSFSPVHLHLPKDVVVQYVDLTSELQTLLYFMRKED
1XCB Chain:C ((3-198))-------VPEAAISRLITYLRILEELEAQGVHRTSSEQLGELAQVTAFQVRKDLSYFGSYGTRGVGYTVPVLKRELRHILGLNRKWGLCIVGMGRLGSALADYPGFGESFELRGF--FDVDPE-KVGRPVRGGV-IEHVDLLPQRVPGR-IEIALLTVPREAAQKAADLLVAAGIKGILNFAPVVLEVPKEVAVENVDFLAGLTRLSF------


General information:
TITO was launched using:
RESULT:

Template: 1XCB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 833 -58404 -70.11 -299.51
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain C : 0.79

3D Compatibility (PKB) : -70.11
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.671

(partial model without unconserved sides chains):
PDB file : Tito_1XCB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1XCB-query.scw
PDB file : Tito_Scwrl_1XCB.pdb: