Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDN----YWYTAEPASDFYNRYPVDLKLAEEYGVNGIRISIAWSRIFPTGYGQVNAKGVEFYHNLFAECHKRHVEPFVTLHHFDTPEALH-SNGDFLNRENIEHFVDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPGIQYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPLDHENPADVRAAELEDIIHNKFILDATYLGRYSAETMEGVNHILSVNGGSLDLREEDFTALEAAKDLNDFLGINYYMSDWME--AFDGETEIIHNGKGKKGSSKYQ-IKGVGRRVAPDYVPRTDWDWIIYPQGLYDQIMRVKKDYPNYKKIYITENGLGYKDEF-VDNTVYDDGRIDYVKQHLEILSDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFETQ-----ERYPKKSAHWYKKVAETQIID
4ZEN Chain:B ((14-480))--KPFPPEFLWGAASAAYQVEGAWNEDGKGLSVWDVFAKQPGRTFKGTNGDVAVDHYHRYQEDVALMAEMGLKAYRFSVSWSRVFPDGNGAVNEKGLDFYDRLIEELRNHGIEPIVTLYHWDVPQALMDAYGAWESRRIIDDFDRYAVTLFQRFGDRVKYWVTLNEQNIFISFGYRLGLHPPGVK-DMKRMYEANHIANLANAKVIQSFRHYVPDGKIGPSFAYSPMYPYD-SRPENVLAFENAEEFQNHWWMDVYAWGMYP----QAAWNYLESQGLEPTVAPGDWELLQAAKP--DFMGVNYYQTTTVEHNPPDGVGEGVMNTTGKKGTSTSSGIPGLFKTVRNPHVDTTNWDWAIDPVGLRIGLRRIANRYQ--LPILITENGLGEFDTLEPGDIVNDDYRIDYLRRHVQEIQRAITDGVDVLGYCAWSFTDLLSWLNGYQKRYGFVYVNRDDESEKDLRRIKKKSFYWYQRVIET----


General information:
TITO was launched using:
RESULT:

Template: 4ZEN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2637 44599 16.91 98.67
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : 16.91
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.527

(partial model without unconserved sides chains):
PDB file : Tito_4ZEN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZEN-query.scw
PDB file : Tito_Scwrl_4ZEN.pdb: