Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIRIENLSVSYKDTLALKDISLVLHGPTITGIIGPNGAGKSTLLKGMLGII-PHQGQAFLDDKEVKKSLHRIAYVEQKINIDYNFPIKVKECVSLGLFPSIPLFRSLKAKHWKKVQEALEIVGLADYAERQISQLSGGQFQRVLIARCLVQEADYILLDEPFAGIDSVSEEIIMNTLRDL-KKAGKTVLIVHHDLSKIPHYFDQVLLVNREVIAFGPTKETFTETNLKEAYGNQLFFNGGDL
3J15 Chain:B ((370-534))----------------------------VIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWD--------LTVAYKPQYIKAEY-------EGTVYELLSKIDSSK-LNSNFYK--TELLKPLGIIDLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGE-------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3J15.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 724 -11486 -15.86 -70.46
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.72

3D Compatibility (PKB) : -15.86
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.490

(partial model without unconserved sides chains):
PDB file : Tito_3J15.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J15-query.scw
PDB file : Tito_Scwrl_3J15.pdb: