Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIEFVRIDDRLVHGQVVTTWLKKYDIEQVIIVNDRISEDKIRQSILKISAPVGLKIVFFSVKRFVEVLNS-VPIKKRTMLIYTNPKDVYDSIEGNLKLEYLNVGQMSKTEENEKVTGGVALGEEDKYYFKKIVDKGTRVEIQMVPNDKVTMLEKFL
1NRZ Chain:B ((1-157))MQITLARIDDRLIHGQVTTVWSKVANAQRIIICNDDVFNDEVRRTLLRQAAPPGMKVNVVSLEKAVAVYHNPQYQDETVFYLFTNPHDVLTMVRQGVQIATLNIGGMAWRPGKKQLTKAVSLDPQDIQAFRELDKLGVKLDLRVVASDPSVNILDKI


General information:
TITO was launched using:
RESULT:

Template: 1NRZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 767 -63372 -82.62 -406.23
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -82.62
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.625

(partial model without unconserved sides chains):
PDB file : Tito_1NRZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NRZ-query.scw
PDB file : Tito_Scwrl_1NRZ.pdb: