Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQYSMRFWKNKYFLLIMLCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNISKSSHSNSSKISQTKNFNDSTGQIHLNQANV----------NEFQQL---KGVG----EKKAQAIVEYRQ-------------------------KNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL
3CI0 Chain:K ((65-187))--------------------------------------------------------------GQIAVTLRDAQACFNLNALAQPTTASRPLAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVQTRLGREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCA


General information:
TITO was launched using:
RESULT:

Template: 3CI0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain K - contact count / total energy / energy per contact / energy per residue : 188 5459 29.03 73.76
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain K : 0.60

3D Compatibility (PKB) : 29.03
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.590

(partial model without unconserved sides chains):
PDB file : Tito_3CI0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CI0-query.scw
PDB file : Tito_Scwrl_3CI0.pdb: