Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLDYLQALKRI--PEARGAWILHGQEPLLEQNLLDTFRKSWQQQ---DIERQRYDISSVSDWKNVFNALNSLSLFSQQLAIEVHGNIKPDAN--------GLKQLKSYIQHN-ETNLLLIVLP--KQDSSSLKSAFFQVVEANGVVVALTANYPQDRQRILAAEAEKLEIQLDNDAWQWLMQHHEHNLLAAKNSLMRVRDTFPDQKLIQIEQLYACLQDQSRYTTYDLSDALLEGNLAQSIKIFQYLIGSGEPESLILWTLSKEMRLLMQLFEQPHN-------ALQLGIWKTKVSLYQQALRRLNPQQFLGWSALLLQIDAAIKGMSNENAQHLMQQAIAELCGKTLFIH
3ZH9 Chain:B ((4-339))------DVWKSLKKGEVHPVYCLYGKETYLLQETVSRIRQTVVDQETKDFNLSVFDLEED-PLDQAIADAETFPFMGERRLVIVKNPYFLTGEKKKEKIEHNVSALESYIQSPAPYTVFVLLAPYEKLDE---RKKLTKALKKHAFMMEAKELNAKETTDFTVNLAKTEQKTIGTEAAEHLVLLVNGHLSSIFQEIQKLCTFIGDREEITLDDVKMLVARSLEQNIFELINKIVNRKRTESLQIFYDLLKQNEEPIKIMALISNQFRLILQTKYFAEQGYGQKQIASNLKVHPFRVKLAMDQARLFSEEELRLIIEQLAVMDYEMKTGK-KDKQLLLELFLLQLLKR-----


General information:
TITO was launched using:
RESULT:

Template: 3ZH9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1400 28029 20.02 89.55
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain B : 0.70

3D Compatibility (PKB) : 20.02
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.557

(partial model without unconserved sides chains):
PDB file : Tito_3ZH9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZH9-query.scw
PDB file : Tito_Scwrl_3ZH9.pdb: