Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYKHAISTVVPARNPRPAGAQGAGFPAQGGSQGGFGGQGAGFGGAQGAGFGGQGGFGGQGGFGGQGGFGGQGGFGGQGGFGGQGGFGGHQGGFGGHQGGFDNDSKFEDGQDDENNR
4J6W Chain:E ((4-69))---GHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVR----------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4J6W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 229 -43506 -189.98 -659.18
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain E : 0.73

3D Compatibility (PKB) : -189.98
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.506

(partial model without unconserved sides chains):
PDB file : Tito_4J6W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4J6W-query.scw
PDB file : Tito_Scwrl_4J6W.pdb: