Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATPFWYNTALHLLKPFYRWRIKRRAESLELYQQECLERFGPFEAPKNVKAIWFHAVSVGETNAAQPLIEYYLKLGQPVLVTNTTKTGQARAKSLFLKEPYLDLFQAVYLPVDQKPLLKKFFELYQPKLLALVETELWPNLIDQAKLQHVPCLLLNARLSEKSAKGYGKVSGLTAGMLKQLDWVLAQDSATRQRYVELGLDEHKSQVVGNIKFDIHAPEAFIKQAAQLRQQWYLENRQVVTIASTHAPEEQQILEAFAPYLNSDRELVCIVVPRHPERFDEVFEICQNLNLITHRRSMGQSIHASTQVYLADSMGELWLWYALSQVCFVGGSLNEPGGGHNILEPMVLNVPTVVGPRYFNFQTIVDEFIDENAVLIAQDAQQVVDIWLACLAEPEATEQLVAQAHKVLQRNQGSLQKHIGVINRYLAEKS
2XCI Chain:B ((38-362))----------------------------------------------NCKGALWVHTASIGEFNTFLPILKELKR-EHRILLTYFSPRAREYLK-TKS----DFYDCLHPLPLDNPFSVKRFEELSKPKALIVVEREFWPSLII---FTKVPKILVNAYAKG---------SLIEKILSKKFDLIIMRTQEDVEKFKTFGA--KRVFSCGNLKFICQKGK--------G---IKL-KGEFIVAGSIHTGEVEIILKAFKEIKKTYSSLKLILVPRHIENAKIFEKKARDFGFKTSFF-----ENLEGDVILVDRFGILKELYPVGKIAIVGGTFVN-IGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSVKKEI-KVEEKSREIKGC--------------------


General information:
TITO was launched using:
RESULT:

Template: 2XCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1731 -242617 -140.16 -746.51
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.69

3D Compatibility (PKB) : -140.16
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.476

(partial model without unconserved sides chains):
PDB file : Tito_2XCI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2XCI-query.scw
PDB file : Tito_Scwrl_2XCI.pdb: