Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKFNNNQSDNLFSQVFGVAKKLSSTGLNILQQSQIGEVSKLVEPLSNGKTVEGSARNKSPFEVEQYESPLQMLREHLPKVTRQVFGRHFRKVNGIATFISPDWNEKISSYLFDWLNDFSSKSTLTEKILEEAGAKDLFELTKDTSRSQRLSQALIEQNKLIASIQGAITGVSGMVGAAVDIPVSLV-LVLRTIYQTGRSHGFDLTEATDQDVVEFIFKEVDISLIAEKQTLLLALKALRNMLETQDIQQFQQVLGSSNDIETLKSWLVDENGKFKWNWLNKVPQLAVVGKFTPVAGAVLSAVYSWKLQEDVGHKAQAIFGAARHYLNEHPNEHLSPLQAYYAAVTLIQKASPRLLNVGENGSVHATQHHKIENHDVISKVSVVVKSNTSEKSEEKVQENVHQGIEHLAEKHVVEHEHSEQKPALEPESEENDDVIEGQKYS
3O2T Chain:A ((21-331))--------------------------------MTTSERVVDLLNQAALITN-------------DSKITVLKQVQELIINKDPTLLDNFLDEIIAFQA----DKSIEVRKFVIGFIEEACKR----DIELLLKLIANLNMLLRDEN--------------------------VNVVKKAILTMTQLYKVALQWMVKSVISELQEACWDMVSAMAGDIILLLDSD---NDGIRTHAIKFVEGLIVTLSPRMADSEIPRRQE---------------------HDISLDRIPRDHPYIQ-----------YNVLWEEGKAALEQLLKFMVHISSINLTTALGSLANIARQ----------------------RPMFMSEVIQAYETLHANLAKSQVSSVRKNLKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMP--


General information:
TITO was launched using:
RESULT:

Template: 3O2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1355 -65403 -48.27 -215.85
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -48.27
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.332

(partial model without unconserved sides chains):
PDB file : Tito_3O2T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3O2T-query.scw
PDB file : Tito_Scwrl_3O2T.pdb: