Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MNHMVTTKKAKVQFNWQDPFLIEQQLSPDERMIHDAAHAYCQERLQPRVLEQFRHETTDPSIFREMGELGLLGPTIPEQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFGTEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKVEGGYRLTGAKMWITNSPIADVFVVWAKEVSAEGNVGDICGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPEENAFPEIRGLKGPFTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQKKLADMQTEIALGLQAALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHALILGRAQTGIAAFSN 4W9U Chain:D ((5-394)) -----------AAFAWEDPFLLEEQLTEDERMIRDSAKAFASDVLLPRVE-------TDPELFHLMGQAGLLGVTLPEDYGAANASYVAYGLVAREVERIDSGYRSMMSVQSSLVMYPIYAYGSDEQRKKYLPGLVSGELIGCFGLTEPDAGS--AGMKTRAEKIDGGYRLSGSKMWISNSPIADVFVVWAKSAAHDNA---IRGFILEKGMKGLSAPKIGGK-SLRASITGEIVMDGVEVSEDAILPNVSGLKGPFGCLNRARYGISWGVLGAAEDCWFRARQYGLDRKQFNKPLAGTQLYQKKLADMQTEIALGIQASLRVGRLFDEGKMAPEMISIVKRNNCGKALDIARQARDMHG------EYHVMRHAQNLETVNTYEGTHDVHALILGRAQTGIQAF--

General information: TITO was launched using: RESULT: Template: 4W9U.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 2061 -180102 -87.39 -481.55 target 2D structure prediction score : 0.65 Monomeric hydrophicity matching model chain D : 0.88 3D Compatibility (PKB) : -87.39 2D Compatibility (Sec. Struct. Predict.) : 0.65 1D Compatibility (Hydrophobicity) : 0.88 QMean score : 0.489

(partial model without unconserved sides chains): PDB file : Tito_4W9U.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4W9U-query.scw PDB file : Tito_Scwrl_4W9U.pdb: