Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------------------------------------------------------MNDEYKNDEDKM-LFEEIENRC-RLNFELRGK--------------MSLIQQKKYLANKSEFTLGHVEKLISDWISSRS---------EFTKIKQPIKF-DMKKLLLNKSEIGNRDQYIRAKGQEIIDSLGEM-----RSYNYLYVTHRADGMVITVGK-SSSN-DIFLDGDLFYQLNTNHLSGTENIILRT-EYGNEIFAKYDEIL-KN-----YLDWAWIIPVESGDAKKLERLLGDELINKKVPILNYYSHRQ
3L0I Chain:A ((23-347))SFSNMVSAKKFYNKAIFTAPKAEVSVKTHIMRPIDFMLMGLREEFNLYSEDHLSAPGTIRLLREKNLLPEEQIARIESVYNQAMSKRFELHAEHEHDEMPYSDAKAMLDEVAKIRELGVQRVTRIENLENAKKLWDNANSMLEKGNISGYLKAANELHKFMKEKNLKEDDLRPELSDKTISPKGYAILQSLWGAASDYSRAAATLTESTVEPGLVSAVNKMSAFFMDCKLSPNERATPDPDFKVGKSKILVGIMQFIKDVADPTSKIWMHNTKALMNHKIAAIQKLERSNNVN-DETLESVLSSKGENLSEYLSYKY


General information:
TITO was launched using:
RESULT:

Template: 3L0I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 693 68696 99.13 319.52
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 99.13
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.182

(partial model without unconserved sides chains):
PDB file : Tito_3L0I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3L0I-query.scw
PDB file : Tito_Scwrl_3L0I.pdb: