Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------MKIEALLERKEQLQIL---ILRNLVLQGGTASINGLRE---HVQLSKASFDQYLEDIELIGRMMEKKVEVQRNEY------QALLVLDEDVSLEKILLFLLQESLKFKMLVYLLEHQQVSIVRLATAFNISESSVFRKIKELNQLLEEF-GLQIKNGQLYGEELQIRYFYYELFQYIPEDQRPLFLQNTPEKRPFILGLDRVLETTFTASAEAQIACWLGITKKRLLNEKSTYATLKE-KKLLYQSDRLYQAIDPIIVMHLSRTAAELNVYETMMFYSFFVSFSIVDEEIFYQYDLTRSKKLPTAVLDTYIRETMLWHYRPRRLKIKEEKAVGYQISQINNEWFFFVGKIEVYERDRLLEQQQKMLGHSLTQLLAKLQETAVQQLPRKRAEDSELSYLMIQYANVLLMIDFYIAKPVVIGIDLESLPIYRIAFQQYLIRELRGIGGIEIGSYEEGKEYDLVITFCQRNKKQCEYYLSEFASPYDIIRLKRRIETLKKEKN--
5DOQ Chain:A ((1-432))MNGYDPVLLSRILTELTLTVHIIYATIGVGVPLMIAIAQWVGIRKNDMHYILLARRWTRGFVITVAVGVVTGTAIGLQLSLLWPNFMQLAGQVISLPLFMETFAFFFEAIFLGIYLYTWDRFENQKKHLLLLIPVAIGSSASAMFITMVNAFMNTPQGFELKNGELVN----------------IDPIVAMFNPAMPTKVAHVLATSY-MTSAFVLASIAAWHLWKG--NRHIYHRKALHLTMKTAFIFSVASALVGDLSGKFLAEYQPEKLAAAEWHFETSSHAPLILFGTLEEDNEVKYALEIP--YALSILAHNHPAAVVTGLNDIPEDERPPLYIHYLFDVMVTIGVFLMVVAAVYWLGSIF----------------RWKWTAKNWFFGLLVAGGPLAMIAIEAGWYLAEV----------------------GRQPWI---LRGYMKTAEGA---------------TTSAHVDTMLVLFCLLYIVLVIASATVLIRMFRRNP


General information:
TITO was launched using:
RESULT:

Template: 5DOQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2005 -64156 -32.00 -156.86
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -32.00
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.248

(partial model without unconserved sides chains):
PDB file : Tito_5DOQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DOQ-query.scw
PDB file : Tito_Scwrl_5DOQ.pdb: