Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISMKVVFHIDEL--E--KWSETGKNVKNLIKASPETTI-VVSVNGIAITGYLDSA------N-----AEFLDL-QGVVFHACANAMRANHIS-----------ESSLPEQVIVVPAGVLDLVELQSQGYAYIKP
2D1P Chain:G ((12-139))--SMRFAIVVTGPAYGTQQASSAFQFAQALIAD--GHELSSVFFYREGVYNANQLTSPASDEFDLVRAWQQLNAQHGVALNICVAAALRRGVVDETEAGRLGLASSNLQQGFTL--SGLGALAEASLTCDRVVQ-


General information:
TITO was launched using:
RESULT:

Template: 2D1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 374 -23417 -62.61 -234.17
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain G : 0.64

3D Compatibility (PKB) : -62.61
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.579

(partial model without unconserved sides chains):
PDB file : Tito_2D1P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2D1P-query.scw
PDB file : Tito_Scwrl_2D1P.pdb: