Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMLKEITFSVFFLQFIEKSLYFASYSFFVTIRNGTSKKMKKQGTRYMEKKQKIILGATSALTIVILILSLFFVIRSSTKKEPIIPEKKITEKAKEPTDDKQQLVTQAKNLAQSYDYDQAIALLEKDSKNGSTETQQLLQTLKKEKEQLIDWSDPTQISHVFFHSLIVDPQKAFHSQQAQGYKDYMVTVEEFNRSIEQLYQNDFVLVNLNDLIQKDEQGNLSFNGLALPEGKKPLVLSQDDVSYYEYMDNSGFPSRLVVSNNNEIKNVYKEKDKEEIGDFDMVPLIDAFVKKHPDFSYRGAKGTLALTGYNGVLGYRTSKSQYGDNEKTKKEIKEAKKVAEQLKKDGWSFASHTWGHLNMTQASLEDVKKDNELWQQEVAPILGK-TNILIYPFGADISDWQPYSAENQKFAYLKSQGFDIF-CNVDASTPAWGQLGTDFYRNARINIDGIRFQSDLDGKNPILDPFINVHDVYDKEARESA
2Y8U Chain:B ((32-155))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PNTIALTFDD----------GPSEYTPQ----------------------LLDLLSRY----------SARATFFVLGDAAA---------------------QNPGLLQRMRDEGHQVGAHTYDHVSLPSLGYDGIASQMTRLEEVIRPALGVAPAYMRPPYLE-------TN--ELVLQVMRDLDYRVISASVD-------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2Y8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 540 -40887 -75.72 -335.14
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.60

3D Compatibility (PKB) : -75.72
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.404

(partial model without unconserved sides chains):
PDB file : Tito_2Y8U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y8U-query.scw
PDB file : Tito_Scwrl_2Y8U.pdb: