Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDNPEISVVPVPETEIKKITLKNDYLEVVLLNYGARLHQIFAPDKEGKSENVLLSYDRFEDVLTDKSFFGATVGPVAGRIRDASWG----EHRLEKNCGSHHIHGGTKGWSF---QFWEVEVFKTPSSIGVVFY--LKDEFSTYPGPITATITYRLTKNELEMTTSA-SSLVETICNPTNHAYFNLSGNGTRDIYEHQLTVFLDGVLELDQEKLPTGNWTKKEKLPIDFRKSPTLQEILACYP-DGLDDVFLLHHPRLSKTSLQLFEKHSGRQMTIATSNKSMVLFSTTGFEADF-SVNGKQMHSNYGLAIEPQEIPDIVHFPKFGSINLHPGQERISQTIYRFSAQ
1SNZ Chain:A ((16-341))------------GGTVEKFQLQSDLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAVIGRVANRIAKGTFKVDGKEYHLAINKEPNSLHGG---VRGFDKVLWTPRVLS----NGVQFSRISPDGEEGYPGELKVWVTYTLDGGELIVNYRAQA-SQATPVNLTNHSYFNLAGQASPNINDHEVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCLKGSKEKHFCARVHHAASGRVLEVYTTQPGVQFYTGNFLDGTLKGKNGAVYPKHSGFCLETQNWPDAVNQPRFPPVLLRPGEEYDHTTWFKFSV-


General information:
TITO was launched using:
RESULT:

Template: 1SNZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1884 -15563 -8.26 -49.56
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -8.26
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.460

(partial model without unconserved sides chains):
PDB file : Tito_1SNZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SNZ-query.scw
PDB file : Tito_Scwrl_1SNZ.pdb: