Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANEQTRSSRRQKQPTPKKSVKKNSGKGSGKSSGTHKKGLFIKILLGILSFFCILFLAGVGLFWYYAKDAPELTDKKLDATVSSKLYTQDGELFEDLGAEKREKISANELPKTLEDAIVSVEDRRFYKHIGVDPIRIIGSALSNFTSGGLQGGSTLTQQLIKLSFFSTSAEDQTLKRKAQEAWMAVRLEQKKSKQEILTYYVNKVYMSNGLYGMETASEMYFGKKLSELSLPQTALLAGMPQAPSAYDPYVYPDQAKKRRDTVLYTMLQNEKISQTEYDQAVNVPVTDGLQELTQSDDNTKIVDNYVKEVINEVQEKTDKNVYTDGLEIYTNLDLDAQKKLYDIVNTDQYVSY----------------------------------------------------------------------------------------------------------PDDEMQVASTLIDTNTGKVKAQIGGRHIAEDVTLGNNLAVNTSRDFGSTMKPVTDYGPAFEYLKYSTGKTITDAPYNYEG---TSTPVGNWDNQYMGTITLRQALYLSRNVPAVKLFNEVGSDKVASFLKNLGIEYS--TIHQSNAISSNTEEQDGTKYGASSLKMAAAYAAFANGGTYYKPQYVNKIVFQDGTEET-YEP--------DGKTAMSPETAYMITDILKDTITEGTGTNAQ-IAGLYQAGKTGTSNYTDDEYAKLGISSGVYPDILFAGYTPNYSISVWTGYNKKMTP-VTSESSHVASDVYRELMQYVSANVTNTDWEMPSGLIRVGGELYYKDQYTARSNAITPSTTIPSSSYVQTPGSSTTETTTQSSSSTSQSESTAESSKESTTAETSEPASSTTVPSSSSEESSTPSSSAPPASSSEPATSGADAANDHTPSSSTSASGNR
4OON Chain:A ((20-765))----------------------------------------------------------------------------------PLKVYSEDGKLISEFGEM-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----PELNAPYIAEMARAEMVGRYGSEAYTEGYKVITTVRSDLQNAASQSVRDGLID-YDQRHGYRGPETRLPGQTRDAWLKHLGQQRSIGGLEPAIVTQVEKSGIMVMTRDGKEEAVTWDSMKWARPFLSNNSMGPMPRQPADVAQAGDQIRVQRQEDGTLRFVQIPAAQSALISLDPKDGAIRSLVGGFSFEQ---SNYNRAIQAKRQPGSSFKPFI-YSAALDN-GFTAASLVNDAPIVFVDEYL----------TFLGPIPLREALYKSRNMVSIRVLQGLGIERAISYITKFGFQRDELPRNFSLALGTA---------TVTPMEIAGAWSVFANGGYKVNPYVIERIESRDGQVLYQANPPRVPVEPTPAERIIDARTAYIMTSMLQDVIKRGTGRRALALKRTDLAGKTGTTNDS--------------KDGWFSGYNSDYVTSVWVGFDQPETLGRREYGGTVALPIWIRYMGFALKDKPMHTMAEPPGIVSLRIDPVTGR----SAAPGTPGA--YFEMFKNE-----------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4OON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1933 43242 22.37 113.79
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 22.37
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.370

(partial model without unconserved sides chains):
PDB file : Tito_4OON.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OON-query.scw
PDB file : Tito_Scwrl_4OON.pdb: