Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFLKVGTGIAYIKVNRKKGINHMKKILIATHGHLASGFLSSIQLLTGKVQEITVINAYVD-E-CDFEQELNVFVNQVNEQDQIFVFTDLFGGSVNQKITKTFLE----KEIAVTILSGFNLPILLEIVLATKE--LTKEDIQELVNKCQQELKMTILDEVHVVNEEEDFF
3IPR Chain:D ((1-140))----------------------MLGIVIATHGALSDGAKDAATVIMGATENIETVNLNSGDDVQALGGQIKTAIENVQQGDGVLVMVDLLSASPYNQAVLVINELEPALQKKIFVVSGTNLPMVLEAINHQLLGTPIAEAAQAIVAQGKESVQAWDISMTSF--------


General information:
TITO was launched using:
RESULT:

Template: 3IPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 634 -28937 -45.64 -219.22
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain D : 0.68

3D Compatibility (PKB) : -45.64
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.645

(partial model without unconserved sides chains):
PDB file : Tito_3IPR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IPR-query.scw
PDB file : Tito_Scwrl_3IPR.pdb: