Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNKGLKIIGVIMSLLLLSVFLAIALINAPYIMPEQLERFRFFTLTNYYMQQYIFWAAVVFAVLAIIILLVVLFYPKSRGTFVMKREDGKLTIDKKAIEGLVRSHLHEEEFIHSPKVRIRSTKNRIHIHVNGDLKRTSSLVGKTGVLMQDIEEEVTKVLGTKETVKVAVTYSGYEEQEDTRDYKHSRVE
1YJ7 Chain:D ((88-163))---------------------------------------------------------------------------------------------NYLKEQDIERLLSKIPGVIDCSVSLNV---PSSAAVLVISSPEVNLAPSVI----QIKNLVKNSVDDLKLENISVVI------------------


General information:
TITO was launched using:
RESULT:

Template: 1YJ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 281 -43638 -155.29 -623.39
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain D : 0.48

3D Compatibility (PKB) : -155.29
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.48
QMean score : 0.311

(partial model without unconserved sides chains):
PDB file : Tito_1YJ7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YJ7-query.scw
PDB file : Tito_Scwrl_1YJ7.pdb: