Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceKKGDCFMGLYEAGGRNPNHIIGQETPDDSGIFELRRENGSVIQVKVKKCQLVAYWGWVPLGQELRVFPSVGYDAKRKTAPLPSLSPNRHSGQGLKVRGANTWIAF
1YD6 Chain:D ((11-31))-----------------------VLPEQPGCYLMKDKHGTVIYV-------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1YD6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 19 -4462 -234.84 -212.48
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain D : 0.57

3D Compatibility (PKB) : -234.84
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.733

(partial model without unconserved sides chains):
PDB file : Tito_1YD6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YD6-query.scw
PDB file : Tito_Scwrl_1YD6.pdb: