Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKEKMFNRGILVASHGN-FASGALMTAEMFVGETTNDRVRTLGLMPGENIVEFEHYFKNQVNELLD--SNQEVIVLTDLIGGSPNNVALSRFLN-LDSVDIVTGFNIPLLVELISSYDSKINLEE----IVHNAQNSLFNVKQQLNVEEEEDLCL
3GDW Chain:A ((2-135))-----NANVGVFVLMHGDSTASSMLKTAQELLGT--S-IGTAMNMPLTMEVQTMYEQLRNQVITQ-KESLNNGILLLTDM--GSLNSFGNMLFEETGIRTKAITMTSTMIVLEAIRMASVGRSLEDIYQNIQLSFESVVREQFRS-----------


General information:
TITO was launched using:
RESULT:

Template: 3GDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 605 -31788 -52.54 -252.28
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -52.54
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.449

(partial model without unconserved sides chains):
PDB file : Tito_3GDW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GDW-query.scw
PDB file : Tito_Scwrl_3GDW.pdb: