Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMKLLMTSVLSTSLFLVACGGGSSDDGPATTNPSGTPTNNIQNPVVKVEAYTSTNLGSVAAESSILTYKMLGQSGQEVQATSLVFTPNTPPPVGGWPIVVWAHGTTGVADACAPSKAALAD-----------STKDLISKLLAAGYVVVAPDYEGLGTPGIHPFLNVKSEAFSITDAVVAARNYLSQRNLLTSKKWGTVGHSQGGHAALGAAQYANRA-Q-LDYKGTVAVAPASNWGSILVDGEAQVANAPIDIKIGTYAQLDTYTALVTAGIRNTQPSFD--YGQVFTSQISSIAAQA--ENLCSGPLYGA-FYEGMSNYAKDHNGTLDGFTRTQPNFMAVPLVKTFLEKDS------QPLQVKVTTPIIIYQGIADPTVPKLATDLLISNATVVGTKINSYVTGNWDHGTAMSSNVDNIVGNVQTLLSAQ
2VEO Chain:B ((34-387))-------------------------------------------GQVIQSRKVPTDIGNANNAASFQLQYRTTNTQNEAVADVATVWIPAKPA--SPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYVVSSDHEGFKAAFIA----GYEEGMAILDGIRALKNYQNL---PSDSKVALEGYSGGAHATVWATSLADSYAPELNIVGASHGGTPVSAKDTFTFLNGG----P----------FAGFALAGVSGLSLAHPDMESFIEARLNAKGQQTLKQIRGRGFCLPQVVLTYPFLNVFSLVN-----------DT-NLLNEAPIAGILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLTAEIFGLVPSLWFIKQAFDG-


General information:
TITO was launched using:
RESULT:

Template: 2VEO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2024 -34557 -17.07 -104.72
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -17.07
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.416

(partial model without unconserved sides chains):
PDB file : Tito_2VEO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VEO-query.scw
PDB file : Tito_Scwrl_2VEO.pdb: