Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLPHVLLTSLLERPSTGFELARRFDRSMGFFWNATHQQIYRELNNMLKKGWVSTLENEMDSGRKKTYQVEQLGRIELASWMTQQSEPAQLRDDLMVRLRAEAQLGNNQILPELLRHLGLHQEKLKLYQTIYDKDFKDSDDLNNRVLYIHKMILELGITMETEWIKWLEQVIPQLKLFAQDNVSGE
3GFI Chain:A ((38-110))--LDFLVLRATSDGPKTMAYLANRY--------FVTQSAITASVDKLEEMGLVVRVRDR-EDRRKILIEITEKGLETFNKGIEI------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 267 -33317 -124.78 -456.40
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -124.78
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.428

(partial model without unconserved sides chains):
PDB file : Tito_3GFI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GFI-query.scw
PDB file : Tito_Scwrl_3GFI.pdb: