Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALFLQRSNQHSNNNRLKRMKSHLRVHYFQHIAGEGFGSCYSFLKAHHATITATEFFALPVDLPLEIEALP-YIEDVDLLLIMGGTMSVNDEANYPWLKIEKRWIRRYLAAGKPAIGLCLGGQLIANALGAAVSRNRYQELGWSTVQRVPNLPKESFL--LPEKINVMQWHSETF-EIPKGAIHLAENSVCRNQMYQIG-SNVLGFQFHPEMTP-----KVLNLLLENEQELSIFKGEYVQSLDELHHCDIQKFEQGNQLLNRAIEFVVNQ
2VXO Chain:B ((27-225))--------------------HYEGAVVILDAGA-QYGKVIDRRVRELF--VQSEIF--PLE---TP--AFAIKEQGFRAIIISGGPNSVYA-EDAPWFDPA------IFTIGKPVLGICYGMQMMNKVFGGTVHKKS---DGVFNISVDNT---CSLFRGLQKEEVVLLTHGDSVDKVADGFKVVARSGNI-VAGIANESKKLYGAQFHPEVGLTENGKVILKNFLYDIA-----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2VXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 961 -47504 -49.43 -269.91
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.67

3D Compatibility (PKB) : -49.43
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.390

(partial model without unconserved sides chains):
PDB file : Tito_2VXO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VXO-query.scw
PDB file : Tito_Scwrl_2VXO.pdb: