Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MNTRHFSQLPKAALAYPKVVQGLIFKKPKGPKILPQVEYVVDTLEIDQNHLKAYNEVCGFQNN----------GFV-PAIYLAVLSQSLQMH--MMTAEAFPFPILGLVHIRNQIKQTRPI-GVTEKLTLSCKLGELKPHDKGVQFDFITTAK--VGNEVVMEGLTTYLSRQKVEKRVGEK-AK-----E--EQAPAYVPKAEWNILENTGRRYAKVSGDFNLIHIHAITAKAFGFKQAIAHGMWSKAKALANLE-L-PNAYEADVWFKLPMFLPSKVEFLTANAD-KKTDFLIRNAKSQKPHVAGTVKAL 1PN4 Chain:D ((4-272)) ----------------------------------------DPVWRFDDRDVILYNIALGATTKQLKYVYENDSDFQVIPTFGHLITFNSGKSQNSFAKLLRNFNPMLLLHGEHYLKVHSWPPPTEGEIKTTFEPIATTPKGTNVVIVHGSKSVDNKSGELIYSNEATYFIRNCQADNKVYADRPAFATNQFLAPKRAPDYQVDVP-VSEDLAALYRLSGDRNPLQIDPNFAKGAKFPKPILHGMCTYGLSAKALIDKFGMFNEIKARFTGIVFPGETLRVLAWKESDDTIVFQTHVVDRGTIAINNAAIK-

General information: TITO was launched using: RESULT: Template: 1PN4.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1255 31144 24.82 128.69 target 2D structure prediction score : 0.49 Monomeric hydrophicity matching model chain D : 0.62 3D Compatibility (PKB) : 24.82 2D Compatibility (Sec. Struct. Predict.) : 0.49 1D Compatibility (Hydrophobicity) : 0.62 QMean score : 0.330

(partial model without unconserved sides chains): PDB file : Tito_1PN4.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1PN4-query.scw PDB file : Tito_Scwrl_1PN4.pdb: