Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------MVSFLFIGL--VVTILL----TPGPTNTLLASAGIQAGVKHSLKLIPAEVIGYLIAITSWGVLLE-----SVSHFIPWLPAILKLMSAGFILYLAFKLWMT-SSEDIKLDRPL-ITPKALFLATLL------NPKALLFASAIFPHAAWEIPHL-----------YFIHIVVFLSLITPIAFLWIMFGTVLISNKVTWLNQRNLQRIAAFILTFFAMPIGYSAISSF
5EDF Chain:A ((2-225))EQTSFNNPEPMTGFEHTVTFDFQGTKMVIPYGYLARYTQDNATKWLSDTPGQDAYSINL-----IEISVYYKKTDQGWVLEPYNQQNKAHFIQFLRDGLDSVDDIVIRKDACSLSTTMGERLLTYGVKKMPSAYPEYEAYEDKRHIPENPYFHEFYYIKKGENPAIITHRNNRINQTEEDSYSTSVGSCINGFTVQYYPFIREKQQLTQQELVGYHQQVEQLVQSFVNN--------------


General information:
TITO was launched using:
RESULT:

Template: 5EDF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 679 -38521 -56.73 -216.41
target 2D structure prediction score : 0.23
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -56.73
2D Compatibility (Sec. Struct. Predict.) : 0.23
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.019

(partial model without unconserved sides chains):
PDB file : Tito_5EDF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EDF-query.scw
PDB file : Tito_Scwrl_5EDF.pdb: