Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNKRYSFLFSSLLAVGLLQGCGDDSSSDQPKDDSNTTPPNLIVDNDPTSCSKLAQDGSSVVVGSNQNGDPAAPEGASGYRLGNTVKYADKYMVVANTPLAVKAGCDVLKAGGSAVDAAVAVQAVLGLVEPQSSTIAGSGFMMYYDAKTKQVTAYDGRETAPAAANEFYLIRQNIYDPNSPPPVPNARRSGRSIGVPGVMRLLEQAQKEHGKLEWKQLFGEAIGLADNGFRIPGRLADAIASNASNLALDADAMRIYFHSDGSPRKVGETMTNKEYADTLKAIVSEGANALHNGRIAQAIVSEAGRTEGDDPAKTPITPSLMTLQDLSNYQVKKRDPICTTYRDRYYVCTMPPPSSGGIAVAQTLGILENFDMSLYPPKNPENEGGVLDVMGVHLVSEAERLAYADRDKYVADTDFVRLLAQGIPSFIDKNYLKQRAALINPNQSMGVAPAGNFNTAAGVDTTVEHGTTQFTIVDAYGNVVSMTSTVESSMGSFHMVDG--FLLSNQLTDFSANP-----YDSTGAPVANRVEGGKRPRSTMAPTLVFKGTTPDEFYMATGSPGGGTIIQYVVKTLVGALDWNLNAQQATSLVNFGATN-SKNTNIDSSNVQLSLVDLIEGLKAKGHGISNTAQTSGISTIMKVNINNQSKYAGGVDPRREGIVLGNGAL
5BPK Chain:C ((1-187))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTHYSVADRWGNAVSVTYTINASYGSAASIDGAGFLLNNEMDDFSIKPGNPNLYGLVGGD-ANAIEANKRPLSSMSPTIVLKN---NKVFLVVGSPGGSRIITTVLQVISNVIDYNMNISEAVSAPRFHMQWLPDELRIEKFGMP---ADVKDNLTKMGYQIVTKPVMGDVNAIQVLPKTKGSVFYGSTDPRKE---------


General information:
TITO was launched using:
RESULT:

Template: 5BPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 758 36053 47.56 201.41
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain C : 0.58

3D Compatibility (PKB) : 47.56
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.374

(partial model without unconserved sides chains):
PDB file : Tito_5BPK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BPK-query.scw
PDB file : Tito_Scwrl_5BPK.pdb: