Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVHFLHTSDWHLGQFFYN----HSRHYEHQQFLSWLLTQIQEKQPHALLIAGDIFDV-INPGSQAQKQLYQFLADAHRIAPHMQTLMIAGNHDSGYRIEQVEPLL-EKYNAKTVGVVRWNEDKTLDLDRLLLPIYNQNQDIVAWCLALPFLRSAEITGFNEHTTNSKNAIAYLHQQLIAEAKRRKTPDQALILMSH-AHMQGGETSDSERPIIIGNEEALSTTLFEDAVDYVALGHLHKPQKVG-QPHIRYSGSPIPLSFSEINYKHQVVEVKIDPSQDIDSRLQFEAVEIPRCIQLHRIR---GELNEVLQQLKALPHGVIENIDHREYVDIEYYSLTP-PQPNLRQQFEAALPPDRYRLVRISRQYVNKDTT---NSNTTQHIALEPPTPEKLFQNIWEKQGYSADDAVLKDFLSLVQEAQKHLENDASH
3THO Chain:B ((1-377))--MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMM-R--TAPVVVLPGNQDWKGLKLFGNFVTSISSDITFVMSFEPVD----------VEAK--RG-QKVRILPFPYPDES----KNEGD--FRFFLESRLNKL-YEE--ALKKEDFAIFMGHFTVEGLAG-----------REIIINRALIPSVVDYAALGHIHSFREIQKQPLTIYPGSLIRIDFGEEADEKGAVFVELKRGEP----PRYERIDASP-LPLKTLYYKKIDTSALKS-IRDSC------RNFPGYVRVVYEEDSGILPDLMG-EIDNLV--------KIERKSRREIEEVLRESPEEFKEELDKLDYFELFKEYLKKRE-ENHEKLLKILDELLDEVKKS-------


General information:
TITO was launched using:
RESULT:

Template: 3THO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1696 54407 32.08 155.01
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : 32.08
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.380

(partial model without unconserved sides chains):
PDB file : Tito_3THO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3THO-query.scw
PDB file : Tito_Scwrl_3THO.pdb: