Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWCFKNGQPVE----TIPLLDRAFHYGDGCFTTIRVF-QN---KIELKARHWERLKLACQKLSLV--ADFELIEQSLQRLQNQNLV-LNGTLKIVISRGEGDRGYSLPKHAADIYI---WFYPKALEQFQPDFIQCGVLNQALGLTMP-SLVGLKSL-NRLEQVLLKKEADQQGWVEALVTDVQGYIVEGVSSNCFIRLNDRWITPELRYNGVHGVMRAEILVRMQHYGIACEVRIIELDEVPQIQSLFFCNALHPMRVVTQISEQILESQAC-LNLFHTLNLNQIH
5CE8 Chain:B ((13-292))MKVWLDGRLVDEEEAKVTVLSPSLNYGFGVFEGIRAYWNGENLYVFRLRDHMERLLRSAKIIGLDVPYTAEELSKAVVETVRANGFKEDLYIRPVAYISKPQISLDVRGL-QASVAIAAIPFGKY---LKVEGVRAAVVSWRRV-HTSMMPVMAKATGIYLNSIMAAVEARARGYDEAIMLNAEGKVVEGSGENIFIVRRGVLMTPPLEDGILEGITRETVISIAGDLGIPLLEKSITREELYAADEAFFVGTAAEITPIIEIDGRVLQRGPITQKIAETYRRIV--


General information:
TITO was launched using:
RESULT:

Template: 5CE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1412 -35990 -25.49 -136.84
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : -25.49
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.417

(partial model without unconserved sides chains):
PDB file : Tito_5CE8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CE8-query.scw
PDB file : Tito_Scwrl_5CE8.pdb: