Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVSTPCKLRGDDFMAKISKYKKKNGQVAWMYKGHIATDPRTGEKINTTRRGFSSKQEAQKDYDEYRHQILYGVKKKAPDMTFEDLYNEWITHQRTSVKASTIAISVRYANNQILPAFGK--LKLSNISVPYCQKVVDEWHSK---YESYDYMRKQTAQILRYGVAMQYIDNNPMEKT----LLPRKK--E---YEKNRKFYSKEELNNLLDAFKDFGNMKQYAFFRLLAYTGMRKSEVLALQWKDIDTFN-KELHVNKTLAVDEFGKVIIQSPKT--RASRRVISLDTETLSILNNWKLQQKEEYLKLGYNTSSKEQHVFTTVKN---------TLYIPNTVNDWLRY-------ILKKYNLP---RITPHGFRHTHASLLLEAGESVKVVQQRLGHENSKVTLDIYAHITNNAPKKTGQDFADMMAHQ
1CRX Chain:A ((17-321))-----------------------------------------------------------------------------------------------AFSEHTWKMLLSVCRSWAA-WCKLNNRKWFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQLNMLHRRSGLPRPSDSNAVSLVMRRIRKENVDAGERAKQALAFERTDFDQVRSLMENSDRCQDIRNLAFLGIAYNTLLRIAEIARIRVKDISRTDGGRMLIHIG------------RTKTLVSTAGVEKALSLGVTKLVERWISVSGVA--------DDPNNYLFCRVRKNGVAAPSATSQLSTRALEGIFEATHRLIYGAKDD-SGQRYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTNVNIV-MNYIRNLDSETGAMVRLLE------


General information:
TITO was launched using:
RESULT:

Template: 1CRX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1086 34791 32.04 129.33
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 32.04
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.346

(partial model without unconserved sides chains):
PDB file : Tito_1CRX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1CRX-query.scw
PDB file : Tito_Scwrl_1CRX.pdb: