Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---LCTTIQKG------QIFRNILTC--MSEFYIKEE---FSYTVCNGKNYASPNRTILCIWEGHIIHVRLDERCNWTRLEGDQTEELESQNVEFKVLQKCVASKYKLDPPHAWDAGHGVKLG--------
2W4Y Chain:A ((1-122))ALGDTLTITLGGSGGTAKVLRKINQDGYTSEYYLPETSSSFRAKVRHTKESVKPNQVQ---------YERHNVEFTETVYASGSTPEFVRQAYVVIRHKVGDVSATVSDLGEALSFYLNEALYGKLIGWES


General information:
TITO was launched using:
RESULT:

Template: 2W4Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 339 18589 54.83 185.89
target 2D structure prediction score : 0.29
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : 54.83
2D Compatibility (Sec. Struct. Predict.) : 0.29
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.232

(partial model without unconserved sides chains):
PDB file : Tito_2W4Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W4Y-query.scw
PDB file : Tito_Scwrl_2W4Y.pdb: