Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALSLEEFVYSLDLRTLPRVLEIQSGIYFEGSVYEMFGNECCLSTGEVIKITGLKIKKMMAEICEGAIGGCESQKPFELPMNFPGL-FKVMADKTPYLSIEEITRTVNIGPSRLGHPCFYHLKDIKLENLIIKQGEPIRF--NSVEEINGETLVNCGVVRNHQSHS---FTLPLSQEGEFYECE--DEHIYTLKEIVEWKIPKNRTRTVKLTDFSNKWDSTNPFPEDFYGTLI-LKPVYEIQGVLKFQKDIVRILPSLDVEVKDITDSY-DANWFLQLLSTDDLFEMTSKEFPVVAEVVEISQGNHLPQSILQREKTIVIHKKYQASRILASEIRSNFPKRHFLIPISYKGKFKRRPREFPTAYDLQIAKSRKETLHVVATKAFHTLHKELSPVSVGDQFLVHHSETTEVVFEGTRKVNVLTCEKVLNKTREDAQLPLYMEGGFVEV-------IHDKKQYQISELCTQFCWPFNVKVAVRDLSIKDDILAATPGLQLEEDITDSYLLISDFANPEECWEI-PMSRLNMTVR-------LVNGSSLPADAGLLQVRSFVEEITEEQYYMMRRYESSLSHPPPRPPKHPSAEEMKLTLLSLAEERTINLPKSLKSHHVDRPKKLPSDESGQDSRAPVGFQNDVADVERQKSKHGPLQPQAPL
3UOX Chain:A ((6-545))KSPALDAVVIGAGVTGIYQAFLINQA--------------------------GMKVLGIEAG---EDVGGTWYWN------RYPGCRLDTESYAYGYFALKGI------------------IPEWEWSENFASQPEMLRYVNRAADAMD---------VRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSAPDIKGIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPL-------------------------GN----SPMSKEKMDSLRNRYPTILEYVKSTDTAFP-------------YHRDPRK---GTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQRVK-DPVVAEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVT-----PEGIKTADAAYDL-DVIIYATGFDAVTGSLDRIDIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMISYMKDNGFTYSEPTQAAENRWTEEVYADFSRTLLAEANAWWVKTTTKPDGSVVRRTLVHVSG-----GPEYRKRCEQVAYNNYNGFELA-----


General information:
TITO was launched using:
RESULT:

Template: 3UOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2932 81164 27.68 158.52
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 27.68
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.148

(partial model without unconserved sides chains):
PDB file : Tito_3UOX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UOX-query.scw
PDB file : Tito_Scwrl_3UOX.pdb: