Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAEN
1YVL Chain:A ((577-657))CIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQ---EPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAE-


General information:
TITO was launched using:
RESULT:

Template: 1YVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 252 -34310 -136.15 -439.87
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.99

3D Compatibility (PKB) : -136.15
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.99
QMean score : 0.781

(partial model without unconserved sides chains):
PDB file : Tito_1YVL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YVL-query.scw
PDB file : Tito_Scwrl_1YVL.pdb: