Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTFTIHTVESAPAEVKEILETVEKDNNGYIPNLIGLLA-NAPTVLEAYQIVSSIHR-R----NSLTPVEREVVQITAAVTNGCAFCVAGHTAFSIKQIQMNDDLIQALRNR-----TPIETDPKLDTLAKFTLAVINTKGRVGDEALSEFLEAGYTQQNALDVVFGVSLAILCNYANNLANTPINPELQPYA
2QEU Chain:B ((9-136))----------TSQDILKQHAAHYESDMG-GLPEALVQLAEYAPETFDAYSRMRTTMLKSEADGAKLPLKYKHLILVVLDAIRDEPIGIVNHTRAAM-NAGLSVDELIEGILLGIIVYGMPAWGKTGRKAVTFAVEFEKEL-----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2QEU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 445 -7136 -16.03 -60.99
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain B : 0.57

3D Compatibility (PKB) : -16.03
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.370

(partial model without unconserved sides chains):
PDB file : Tito_2QEU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QEU-query.scw
PDB file : Tito_Scwrl_2QEU.pdb: